, including all inherited members.
addRea(SV *subs, SV *prds, int8 rev=0, SV *subsst=NULL, SV *prdsst=NULL, SV *cats=NULL, SV *inhs=NULL, SV *inhd=NULL, SV *prps=NULL) | CNet | |
Net::addRea(array< int32 > *subs, array< int32 > *prds, int8 rev=0, array< int32 > *subsst=NULL, array< int32 > *prdsst=NULL, array< int32 > *cat=NULL, array< int32 > *inhs=NULL, array< int32 > *inhd=NULL, array< int32 > *prps=NULL) | Net | |
appendToString(string &st) | Net | |
at(int32 reaidx, int32 comidx) | Net | |
catalysts(int32 reaidx) | Net | [inline] |
CNet() | CNet | |
CNet(NetStruct &str2) | CNet | |
CNet(int32 nr, int32 nc) | CNet | |
CNet(const CNet &net2) | CNet | |
CNet(SV *st) | CNet | |
delRea(int32 reaidx) | Net | |
delRea(array< int8 > *mask) | Net | |
delRea(array< int32 > *idxs) | Net | |
enabled(int32 reaidx) | Net | [inline] |
hasRea(array< int32 > *subs, array< int32 > *prds, int8 rev=-10, array< int32 > *subsst=NULL, array< int32 > *prdsst=NULL) | Net | |
inhibited(int32 reaidx) | Net | [inline] |
inhibitors(int32 reaidx) | Net | [inline] |
initFromString(string &st, int32 &pos) | Net | |
metabolites(int32 reaidx) | Net | |
neighbors(int32 comidx) | Net | |
Net() | Net | |
Net(NetStruct &str2) | Net | |
Net(int32 nr, int32 nc) | Net | |
Net(const Net &net2) | Net | |
Net(string &st) | Net | |
Net(string &st, int32 &pos) | Net | |
numC() | Net | [inline] |
numR() | Net | [inline] |
preds(int32 comidx) | Net | [inline] |
print() | Net | |
printToString() | Net | |
prod_stoich(int32 reaidx) | Net | [inline] |
products(int32 reaidx) | Net | [inline] |
propagators(int32 reaidx) | Net | [inline] |
reaMask | Net | |
replaceRea(int32 reaidx, SV *subs, SV *prds, int8 rev=0, SV *subsst=NULL, SV *prdsst=NULL, SV *cats=NULL, SV *inhs=NULL, SV *inhd=NULL, SV *prps=NULL) | CNet | |
Net::replaceRea(int32 reaidx, array< int32 > *subs, array< int32 > *prds, int8 rev=0, array< int32 > *subsst=NULL, array< int32 > *prdsst=NULL, array< int32 > *cat=NULL, array< int32 > *inhs=NULL, array< int32 > *inhd=NULL, array< int32 > *prps=NULL) | Net | |
resize(int32 nr, int32 nc) | Net | |
rev(int32 reaidx) | Net | [inline] |
str | Net | [protected] |
subs_stoich(int32 reaidx) | Net | [inline] |
substrates(int32 reaidx) | Net | [inline] |
succs(int32 comidx) | Net | [inline] |
tos() | CNet | |
toString() | Net | |
~CNet() | CNet | |
~Net() | Net | |